MolNFT v1 · #11869 · protein

Pseudomonas aeruginosa azurin OS(BPY)2(IM)(HIS83)

1JZJ: “Pseudomonas aeruginosa azurin OS(BPY)2(IM)(HIS83)”. X-ray diffraction, 4 ligands (DOS, LOS, IME). MolNFT v1 #11869 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1JZJ
Type: protein
Length: 256 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Azurin
UniProt: P00282
Ligands: DOS, LOS, IME, CU

Structure

x-ray diffraction · 1 distinct chain · 17% helix, 35% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Azurin	protein	128	17% helix, 35% strand	P00282

Ligands and binding sites

DOS · Delta-bis(2,2'-bipyridine)imidazole osmium (II) · ligand · 2 copies · chains A, B
LOS · Lambda-bis(2,2'-bipyridine)imidazole osmium (II) · ligand · 2 copies · chains A, B
IME · Tetra(imidazole)diaquacopper (II) · ligand · chains A
CU · Copper (II) ion · metal · 3 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

A–B · 542 Å² buried · 0 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

1JZJ · Pseudomonas aeruginosa Azurin Os(bpy)2(im)(His83) · the same entry in another collection · chain A against A, TM-score 1.00
P00282 · AlphaFold monomer V2.0 prediction for azurin (P00282) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P00282
Elsewhere: RCSB PDB 1JZJ · PDBe 1JZJ · UniProt P00282

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