MolNFT v1 · #11865 · protein

Pseudomonas aeruginosa oxidized AZURIN(CU2+) RU(TPY)(PHEN) (HIS83)

1JZF: “Pseudomonas aeruginosa oxidized AZURIN(CU2+) RU(TPY)(PHEN) (HIS83)”. X-ray diffraction, 3 ligands (RTB, IME, CU). MolNFT v1 #11865 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1JZF
Type: protein
Length: 128 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Azurin
UniProt: P00282
Ligands: RTB, IME, CU

Structure

x-ray diffraction · 1 distinct chain · 17% helix, 34% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Azurin	protein	128	17% helix, 34% strand	P00282

Ligands and binding sites

RTB · (2,2':6',2'-terpyridine)-(1,10-phenanthroline) ruthenium (II) · ligand · chains A
IME · Tetra(imidazole)diaquacopper (II) · ligand · chains A
CU · Copper (II) ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

1JZF · Pseudomonas aeruginosa Oxidized Azurin(Cu2+) Ru(tpy)(phen)(His83) · the same entry in another collection · chain A against A, TM-score 1.00
P00282 · AlphaFold monomer V2.0 prediction for azurin (P00282) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P00282
Elsewhere: RCSB PDB 1JZF · PDBe 1JZF · UniProt P00282

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