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MolNFT v1 · #118372 · protein

Peracetylated bovine carbonic anhydrase II

5EZT · Carbonic anhydrase 2: “Peracetylated bovine carbonic anhydrase II”. X-ray diffraction, 1 ligand (ZN), 2 pockets (best druggability 0.51). MolNFT v1 #118372 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
5EZT
Type
protein
Length
257 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Carbonic anhydrase 2
EC
4.2.1.1
UniProt
P00921
Ligands
ZN
Pockets
2 · best druggability 0.51

Structure

x-ray diffraction · 1 distinct chain · 16% helix, 30% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
XCarbonic anhydrase 2 (EC 4.2.1.1)protein25716% helix, 30% strandP00921

Ligands and binding sites

  • ZN · Zinc ion · metal · chains X

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
11360.510.8023empty
2500.250.7317empty

Modifications

Observed in the structure: 18 modified (acetylation).

Compared structures

  • 5EZT · Peracetylated Bovine Carbonic Anhydrase II · the same entry in another collection · chain X against X, TM-score 1.00
  • P00921 · AlphaFold monomer V2.0 prediction for carbonic anhydrase 2 (P00921) · a predicted model of the same protein · chain X against A, TM-score 0.99

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