MolNFT v1 · #118314 · protein
Crystal structure of glutathione transferase F2 from populus trichocarpa
5EY6 · Phi class glutathione transferase GSTF2: “Crystal structure of glutathione transferase F2 from populus trichocarpa”. X-ray diffraction, 5 pockets (best druggability 0.68). MolNFT v1 #118314 on GenesisL1: 3D structure, binding sites…
- PDB
- 5EY6
- Type
- protein
- Length
- 432 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Phi class glutathione transferase GSTF2
- EC
- 2.5.1.18
- UniProt
- B9GQ64
- Pockets
- 5 · best druggability 0.68
Structure
x-ray diffraction · 2 distinct chains · 59% helix, 6% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phi class glutathione transferase GSTF2 (EC 2.5.1.18) | protein | 215 | 57% helix, 7% strand | B9GQ64 |
| B | Phi class glutathione transferase GSTF2 (EC 2.5.1.18) | protein | 217 | 61% helix, 6% strand | B9GQ64 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 178 | 0.68 | 0.87 | 36 | empty |
| 2 | 461 | 0.61 | 0.75 | 39 | empty |
| 3 | 299 | 0.53 | 0.75 | 32 | empty |
| 4 | 122 | 0.41 | 0.75 | 20 | empty |
| 5 | 87 | 0.34 | 0.74 | 18 | empty |
Interfaces
1 interface between chains.
- A–B · 1379 Ų buried · 20 hydrogen bonds · protein-protein
Compared structures
- 5EY6 · Crystal structure of glutathione transferase F2 from populus trichocarpa · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B9GQ64
- Elsewhere: RCSB PDB 5EY6 · PDBe 5EY6 · UniProt B9GQ64
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