MolNFT v1 · #118056 · protein
Isoform-specific inhibition of sumo-dependent protein-protein interactions
5EQL · Sumo-affirmer-S2D5: “Isoform-specific inhibition of sumo-dependent protein-protein interactions”. X-ray diffraction. MolNFT v1 #118056 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5EQL
- Type
- protein
- Length
- 158 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Sumo-affirmer-S2D5; Small ubiquitin-related modifier 2
- UniProt
- P61956
Structure
x-ray diffraction · 2 distinct chains · 20% helix, 46% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sumo-affirmer-S2D5 | protein | 82 | 22% helix, 54% strand | — |
| B | Small ubiquitin-related modifier 2 | protein | 76 | 18% helix, 38% strand | P61956 |
Interfaces
1 interface between chains.
- A–B · 650 Ų buried · 10 hydrogen bonds · protein-protein
Compared structures
- 5EQL · Isoform-specific inhibition of SUMO-dependent protein-protein interactions · the same entry in another collection · chain A against A, TM-score 1.00
- P61956 · AlphaFold monomer V2.0 prediction for small ubiquitin-related modifier 2 (P61956) · a predicted model of the same protein · chain B against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P61956
- Elsewhere: RCSB PDB 5EQL · PDBe 5EQL · UniProt P61956
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