MolNFT v1 · #117998 · protein
C-terminal domain of the 16S/23S rRNA (cytidine-2'-O)- methyltransferase tlya.
5EOV · 16S/23S rRNA (cytidine-2'-O)-methyltransferase tlya: “C-terminal domain of the 16S/23S rRNA (cytidine-2'-O)- methyltransferase tlya.”. X-ray diffraction, 2 pockets (best druggability 0.32). MolNFT v1 #117998 on GenesisL1: 3D…
- PDB
- 5EOV
- Type
- protein
- Length
- 205 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 16S/23S rRNA (cytidine-2'-O)-methyltransferase tlya
- EC
- 2.1.1.226, 2.1.1.227
- UniProt
- P9WJ62
- Pockets
- 2 · best druggability 0.32
Structure
x-ray diffraction · 1 distinct chain · 37% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 16S/23S rRNA (cytidine-2'-O)-methyltransferase tlya (EC 2.1.1.226, 2.1.1.227) | protein | 205 | 37% helix, 23% strand | P9WJ62 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 59 | 0.32 | 0.76 | 17 | empty |
| 2 | 60 | 0.26 | 0.72 | 20 | empty |
Compared structures
- 5EOV · C-terminal domain of the 16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA. · the same entry in another collection · chain A against A, TM-score 1.00
- P9WJ62 · AlphaFold monomer V2.0 prediction for 16S/23S rRNA (cytidine-2'-O)-methyltransferase tlya… · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P9WJ62
- Elsewhere: RCSB PDB 5EOV · PDBe 5EOV · UniProt P9WJ62
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