MolNFT v1 · #117966 · protein
Ketosynthase from module 6 connected to acyl carrier protein from module 5 (unobservable) of the bacillaene synthase from bacillus subtilis 168
5ENY · Polyketide synthase pksl: “Ketosynthase from module 6 connected to acyl carrier protein from module 5 (unobservable) of the bacillaene…”. X-ray diffraction, 20 pockets (best druggability 0.78). MolNFT v1 #117966 on GenesisL1: 3D…
- PDB
- 5ENY
- Type
- protein
- Length
- 4,384 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Polyketide synthase pksl
- UniProt
- Q05470
- Pockets
- 20 · best druggability 0.78
Structure
x-ray diffraction · 2 distinct chains · 38% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C, E, G | Polyketide synthase pksl | protein | 563 | 38% helix, 20% strand | Q05470 |
| B, D, F, H | Polyketide synthase pksl | protein | 533 | 38% helix, 20% strand | Q05470 |
Pockets
20 pockets found on a 1 Å grid, 20 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 992 | 0.78 | 0.80 | 96 | empty |
| 2 | 1078 | 0.76 | 0.79 | 97 | empty |
| 3 | 1125 | 0.76 | 0.79 | 104 | empty |
| 4 | 778 | 0.76 | 0.80 | 75 | empty |
| 5 | 902 | 0.74 | 0.78 | 79 | empty |
Interfaces
11 interfaces between chains.
- A–B · 1905 Ų buried · 27 hydrogen bonds · protein-protein
- C–D · 1902 Ų buried · 28 hydrogen bonds · protein-protein
- G–H · 1887 Ų buried · 27 hydrogen bonds · protein-protein
- E–F · 1887 Ų buried · 27 hydrogen bonds · protein-protein
- F–G · 595 Ų buried · 11 hydrogen bonds · protein-protein
Compared structures
- 5ENY · Ketosynthase from module 6 connected to acyl carrier protein from module 5 (unobservable)… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q05470
- Elsewhere: RCSB PDB 5ENY · PDBe 5ENY · UniProt Q05470
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