MolNFT v1 · #117842 · protein

Hu DNA-binding protein from thermus thermophilus

5EKA · DNA-binding protein hu: “Hu DNA-binding protein from thermus thermophilus”. X-ray diffraction. MolNFT v1 #117842 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5EKA
Type: protein
Length: 85 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: DNA-binding protein hu
UniProt: P19436

Structure

x-ray diffraction · 1 distinct chain · 46% helix, 22% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	DNA-binding protein hu	protein	85	46% helix, 22% strand	P19436

Ligands and binding sites

GOL · Glycerol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

5EKA · HU DNA-binding protein from Thermus thermophilus · the same entry in another collection · chain A against A, TM-score 1.00
P19436 · AlphaFold monomer V2.0 prediction for DNA-binding protein hu (P19436) · a predicted model of the same protein · chain A against A, TM-score 0.91

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P19436
Elsewhere: RCSB PDB 5EKA · PDBe 5EKA · UniProt P19436

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