MolNFT v1 · #117335 · protein
Crystal structure of mouse CNTN6 FN1-FN3 domains
5E55 · Contactin-6: “Crystal structure of mouse CNTN6 FN1-FN3 domains”. X-ray diffraction, 5 pockets (best druggability 0.46). MolNFT v1 #117335 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5E55
- Type
- protein
- Length
- 611 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Contactin-6
- UniProt
- Q9JMB8
- Pockets
- 5 · best druggability 0.46
Structure
x-ray diffraction · 2 distinct chains · 1% helix, 47% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Contactin-6 | protein | 304 | 1% helix, 46% strand | Q9JMB8 |
| B | Contactin-6 | protein | 307 | 1% helix, 47% strand | Q9JMB8 |
Pockets
5 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 181 | 0.46 | 0.75 | 20 | empty |
| 2 | 148 | 0.43 | 0.75 | 19 | empty |
| 3 | 165 | 0.42 | 0.74 | 26 | empty |
| 4 | 74 | 0.34 | 0.75 | 18 | empty |
| 5 | 52 | 0.25 | 0.73 | 13 | empty |
Interfaces
1 interface between chains.
- A–B · 933 Ų buried · 9 hydrogen bonds · protein-protein
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9JMB8
- Elsewhere: RCSB PDB 5E55 · PDBe 5E55 · UniProt Q9JMB8
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