MolNFT v1 · #11725 · protein
Anti-blood group a fv
1JV5 · Ig kappa chain precursor V region: “Anti-blood group a fv”. X-ray diffraction, 2 pockets (best druggability 0.43). MolNFT v1 #11725 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1JV5
- Type
- protein
- Length
- 224 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ig kappa chain precursor V region; Ig chain heavy chain precursor V region
- UniProt
- P01594
- Pockets
- 2 · best druggability 0.43
Structure
x-ray diffraction · 2 distinct chains · 4% helix, 50% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ig kappa chain precursor V region | protein | 107 | 3% helix, 49% strand | P01594 |
| B | Ig chain heavy chain precursor V region | protein | 117 | 5% helix, 52% strand | — |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 72 | 0.43 | 0.80 | 14 | empty |
| 2 | 74 | 0.31 | 0.74 | 17 | empty |
Interfaces
1 interface between chains.
- A–B · 766 Ų buried · 3 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P01594
- Elsewhere: RCSB PDB 1JV5 · PDBe 1JV5 · UniProt P01594
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