MolNFT v1 · #117199 · protein

Crystal structure of pasta domains 2, 3 and 4 of mycobacterium tuberculosis protein kinase B

5E12 · SERINE/THREONINE-protein kinase pknb: “Crystal structure of pasta domains 2, 3 and 4 of mycobacterium tuberculosis protein kinase B”. X-ray diffraction. MolNFT v1 #117199 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5E12
Type: protein
Length: 391 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: SERINE/THREONINE-protein kinase pknb
EC: 2.7.11.1
UniProt: P9WI81

Structure

x-ray diffraction · 2 distinct chains · 17% helix, 35% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	SERINE/THREONINE-protein kinase pknb (EC 2.7.11.1)	protein	202	18% helix, 36% strand	P9WI81
B	SERINE/THREONINE-protein kinase pknb (EC 2.7.11.1)	protein	189	16% helix, 33% strand	P9WI81

Ligands and binding sites

FLC · Citrate anion · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

A–B · 501 Å² buried · 9 hydrogen bonds · protein-protein

Compared structures

5E12 · Crystal Structure of PASTA Domains 2, 3 and 4 of Mycobacterium tuberculosis Protein… · the same entry in another collection · chain A against A, TM-score 1.00
P9WI81 · AlphaFold monomer V2.0 prediction for SERINE/THREONINE-protein kinase pknb (P9WI81) · a predicted model of the same protein · chain A against A, TM-score 0.92

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P9WI81
Elsewhere: RCSB PDB 5E12 · PDBe 5E12 · UniProt P9WI81

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