MolNFT v1 · #117198 · protein
Second PDZ domain of ligand of numb protein X 2 by laue crystallography (no electric field)
5E11: “Second PDZ domain of ligand of numb protein X 2 by laue crystallography (no electric field)”. X-ray diffraction, 1 pocket (best druggability 0.37). MolNFT v1 #117198 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5E11
- Type
- protein
- Length
- 95 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ligand of numb protein X 2
- UniProt
- Q8N448
- Pockets
- 1 · best druggability 0.37
Structure
x-ray diffraction · 1 distinct chain · 15% helix, 37% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ligand of numb protein X 2 | protein | 95 | 15% helix, 37% strand | Q8N448 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 70 | 0.37 | 0.77 | 18 | empty |
Compared structures
- 5E11 · Second PDZ domain of Ligand of Numb protein X 2 by Laue crystallography (no electric… · the same entry in another collection · chain A against A, TM-score 1.00
- Q8N448 · AlphaFold monomer V2.0 prediction for ligand of numb protein X 2 (Q8N448) · a predicted model of the same protein · chain A against A, TM-score 0.93
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8N448
- Elsewhere: RCSB PDB 5E11 · PDBe 5E11 · UniProt Q8N448
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