MolNFT v1 · #117170 · protein

Structure of sin nombre virus nucleoprotein in long-axis crystal form

5E06 · Nucleocapsid protein: “Structure of sin nombre virus nucleoprotein in long-axis crystal form”. X-ray diffraction, 1 pocket (best druggability 0.55). MolNFT v1 #117170 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5E06
Type: protein
Length: 270 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Nucleocapsid protein
UniProt: Q9E1J8
Pockets: 1 · best druggability 0.55

Structure

x-ray diffraction · 1 distinct chain · 56% helix, 7% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Nucleocapsid protein	protein	270	56% helix, 7% strand	Q9E1J8

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	267	0.55	0.77	41	empty

Compared structures

5E06 · Structure of Sin Nombre virus nucleoprotein in long-axis crystal form · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9E1J8
Elsewhere: RCSB PDB 5E06 · PDBe 5E06 · UniProt Q9E1J8

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