MolNFT v1 · #117134 · protein
Acyl transferase from bacillaene pks
5DZ6 · Polyketide biosynthesis malonyl CoA-acyl carrier protein…: “Acyl transferase from bacillaene pks”. X-ray diffraction, 2 ligands (BR, CL), 1 pocket (best druggability 0.66). MolNFT v1 #117134 on GenesisL1: 3D structure, binding sites…
- PDB
- 5DZ6
- Type
- protein
- Length
- 288 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Polyketide biosynthesis malonyl CoA-acyl carrier protein transacylase pksc
- EC
- 2.3.1.39
- UniProt
- O34825
- Ligands
- BR, CL
- Pockets
- 1 · best druggability 0.66
Structure
x-ray diffraction · 1 distinct chain · 51% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Polyketide biosynthesis malonyl CoA-acyl carrier protein transacylase pksc (EC 2.3.1.39) | protein | 288 | 51% helix, 15% strand | O34825 |
Ligands and binding sites
- BR · Bromide ion · ion · 2 copies · chains A
- CL · Chloride ion · ion · 2 copies · chains A
- GOL · Glycerol · additive · chains A
- EDO · 1,2-ethanediol · additive · chains A
- PEG · Di(hydroxyethyl)ether · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 287 | 0.66 | 0.82 | 44 | GOL, CL |
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O34825
- Elsewhere: RCSB PDB 5DZ6 · PDBe 5DZ6 · UniProt O34825
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