MolNFT v1 · #117133 · protein

Crystal structure of dendroaspis polylepis mambalgin-1 wild-type in P41212 space group

5DZ5: “Crystal structure of dendroaspis polylepis mambalgin-1 wild-type in P41212 space group”. X-ray diffraction. MolNFT v1 #117133 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5DZ5
Type: protein
Length: 114 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Mambalgin-1
UniProt: P0DKR6

Structure

x-ray diffraction · 1 distinct chain · 5% helix, 47% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Mambalgin-1	protein	57	5% helix, 47% strand	P0DKR6

Interfaces

1 interface between chains.

A–B · 657 Å² buried · 14 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 8 disulfide (disulfide).

Compared structures

5DZ5 · Crystal structure of Dendroaspis polylepis mambalgin-1 wild-type in P41212 space group · the same entry in another collection · chain A against A, TM-score 1.00
P0DKR6 · AlphaFold monomer V2.0 prediction for mambalgin-1 (P0DKR6) · a predicted model of the same protein · chain A against A, TM-score 0.78

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P0DKR6
Elsewhere: RCSB PDB 5DZ5 · PDBe 5DZ5 · UniProt P0DKR6

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