MolNFT v1 · #117016 · protein
Fc design 20.8.37 a chain homodimer Y349S/T366M/K370Y/K409V
5DVL · Ig gamma-1 chain C region: “Fc design 20.8.37 a chain homodimer Y349S/T366M/K370Y/K409V”. X-ray diffraction. MolNFT v1 #117016 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5DVL
- Type
- protein
- Length
- 221 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ig gamma-1 chain C region; Fc-III peptide
- UniProt
- P01857
Structure
x-ray diffraction · 2 distinct chains · 10% helix, 50% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ig gamma-1 chain C region | protein | 208 | 10% helix, 49% strand | P01857 |
| B | Fc-III peptide | protein | 13 | 0% helix, 69% strand | — |
Interfaces
1 interface between chains.
- A–B · 622 Ų buried · 9 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 5DVL · Fc Design 20.8.37 A chain homodimer Y349S/T366M/K370Y/K409V · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P01857
- Elsewhere: RCSB PDB 5DVL · PDBe 5DVL · UniProt P01857
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