MolNFT v1 · #116785 · protein

Crystal structure of the human cytomegalovirus UL53 (residues 72-292)

5DOE · Virion egress protein UL31 homolog: “Crystal structure of the human cytomegalovirus UL53 (residues 72-292)”. X-ray diffraction, 1 ligand (ZN), 1 pocket (best druggability 0.35). MolNFT v1 #116785 on GenesisL1: 3D structure, binding…

PDB: 5DOE
Type: protein
Length: 219 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Virion egress protein UL31 homolog
UniProt: P16794
Ligands: ZN
Pockets: 1 · best druggability 0.35

Structure

x-ray diffraction · 1 distinct chain · 32% helix, 21% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
B	Virion egress protein UL31 homolog	protein	219	32% helix, 21% strand	P16794

Ligands and binding sites

ZN · Zinc ion · metal · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	86	0.35	0.75	20	empty

Compared structures

5DOE · Crystal structure of the Human Cytomegalovirus UL53 (residues 72-292) · the same entry in another collection · chain B against B, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P16794
Elsewhere: RCSB PDB 5DOE · PDBe 5DOE · UniProt P16794

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