MolNFT v1 · #116594 · protein
The crystal structure of ct
5DIJ · Tqaa: “The crystal structure of ct”. X-ray diffraction, 1 ligand (CL), 6 pockets (best druggability 0.73). MolNFT v1 #116594 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5DIJ
- Type
- protein
- Length
- 441 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Tqaa
- UniProt
- F1CWE4
- Ligands
- CL
- Pockets
- 6 · best druggability 0.73
Structure
x-ray diffraction · 1 distinct chain · 34% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Tqaa | protein | 441 | 34% helix, 23% strand | F1CWE4 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
6 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 397 | 0.73 | 0.83 | 46 | CL |
| 2 | 179 | 0.60 | 0.82 | 30 | empty |
| 3 | 269 | 0.59 | 0.78 | 33 | empty |
| 4 | 220 | 0.52 | 0.76 | 29 | empty |
| 5 | 126 | 0.52 | 0.80 | 18 | empty |
Compared structures
- 5DIJ · The crystal structure of CT · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt F1CWE4
- Elsewhere: RCSB PDB 5DIJ · PDBe 5DIJ · UniProt F1CWE4
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