MolNFT v1 · #116273 · protein
Crystal structure of the metagenomic carboxyl esterase MGS0156
5D8M: “Crystal structure of the metagenomic carboxyl esterase MGS0156”. X-ray diffraction, 2 pockets (best druggability 0.73). MolNFT v1 #116273 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5D8M
- Type
- protein
- Length
- 332 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Metagenomic carboxyl esterase MGS0156
- UniProt
- A0A0G3FEJ8
- Pockets
- 2 · best druggability 0.73
Structure
x-ray diffraction · 1 distinct chain · 40% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Metagenomic carboxyl esterase MGS0156 | protein | 332 | 40% helix, 13% strand | A0A0G3FEJ8 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 482 | 0.73 | 0.81 | 40 | empty |
| 2 | 231 | 0.53 | 0.77 | 32 | empty |
Modifications
Observed in the structure: 5 modified, 1 disulfide (engineered, disulfide).
Compared structures
- 5D8M · Crystal structure of the metagenomic carboxyl esterase MGS0156 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0G3FEJ8
- Elsewhere: RCSB PDB 5D8M · PDBe 5D8M · UniProt A0A0G3FEJ8
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