MolNFT v1 · #116268 · protein + RNA
Crystal structure of the base of the ribosomal P stalk from methanococcus jannaschii with antibiotic thiostrepton
5D8H: “Crystal structure of the base of the ribosomal P stalk from methanococcus jannaschii with antibiotic…”. X-ray diffraction. MolNFT v1 #116268 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5D8H
- Type
- protein + RNA
- Length
- 456 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P54049, P54030
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | rna | 74 | — | — |
| B | — | protein | 207 | — | P54049 |
| C | — | protein | 158 | — | P54030 |
| D | — | protein | 17 | — | — |
Compared structures
- P54049 · AlphaFold monomer V2.0 prediction for 50S ribosomal protein L10 (P54049) · a predicted model of the same protein · chain B against A, TM-score 0.90
- P54030 · AlphaFold monomer V2.0 prediction for 50S ribosomal protein L11 (P54030) · a predicted model of the same protein · chain C against A, TM-score 0.89
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P54049
- Every structure of UniProt P54030
- Elsewhere: RCSB PDB 5D8H · PDBe 5D8H · UniProt P54049 · UniProt P54030
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