MolNFT v1 · #116264 · protein
Crystal structure of D-alanine-D-alanine ligase from acinetobacter baumannii
5D8D: “Crystal structure of D-alanine-D-alanine ligase from acinetobacter baumannii”. X-ray diffraction. MolNFT v1 #116264 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5D8D
- Type
- protein
- Length
- 1,676 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- B2I1J3
Structure
x-ray diffraction · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 282 | — | B2I1J3 |
| B | — | protein | 282 | — | B2I1J3 |
| C | — | protein | 274 | — | B2I1J3 |
| D | — | protein | 284 | — | B2I1J3 |
| E | — | protein | 276 | — | B2I1J3 |
| F | — | protein | 278 | — | B2I1J3 |
Compared structures
- 5D8D · Crystal structure of D-alanine-D-alanine ligase from Acinetobacter baumannii · the same entry in another collection · chain F against F, TM-score 1.00
- B2I1J3 · AlphaFold monomer V2.0 prediction for D-alanine--D-alanine ligase (B2I1J3) · a predicted model of the same protein · chain D against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B2I1J3
- Elsewhere: RCSB PDB 5D8D · PDBe 5D8D · UniProt B2I1J3
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