MolNFT v1 · #116086 · protein
Directed evolutionary changes in kemp eliminase KE07 - crystal 7 round 5
5D2Y · De novo designed kemp eliminase KE07: “Directed evolutionary changes in kemp eliminase KE07 - crystal 7 round 5”. X-ray diffraction, 2 pockets (best druggability 0.65). MolNFT v1 #116086 on GenesisL1: 3D structure, binding sites and…
- PDB
- 5D2Y
- Type
- protein
- Length
- 250 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- De novo designed kemp eliminase KE07
- Pockets
- 2 · best druggability 0.65
Structure
x-ray diffraction · 1 distinct chain · 42% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | De novo designed kemp eliminase KE07 | protein | 250 | 42% helix, 25% strand | — |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 361 | 0.65 | 0.79 | 50 | empty |
| 2 | 66 | 0.29 | 0.74 | 14 | empty |
Compared structures
- 5D2Y · Directed evolutionary changes in Kemp Eliminase KE07 - Crystal 7 Round 5 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 5D2Y · PDBe 5D2Y
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