MolNFT v1 · #115928 · protein
Crystal structure of the T33-51H designed self-assembling protein tetrahedron
5CY5 · T33-51H-B: “Crystal structure of the T33-51H designed self-assembling protein tetrahedron”. X-ray diffraction, 3 pockets (best druggability 0.52). MolNFT v1 #115928 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5CY5
- Type
- protein
- Length
- 286 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- T33-51H-B; T33-51H-a
- Pockets
- 3 · best druggability 0.52
Structure
x-ray diffraction · 2 distinct chains · 77% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | T33-51H-B | protein | 149 | 74% helix, 3% strand | — |
| A | T33-51H-a | protein | 137 | 80% helix, 0% strand | — |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 202 | 0.52 | 0.77 | 27 | empty |
| 2 | 243 | 0.46 | 0.73 | 30 | empty |
| 3 | 71 | 0.36 | 0.77 | 13 | empty |
Interfaces
1 interface between chains.
- B–A · 689 Ų buried · 2 hydrogen bonds · protein-protein
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 5CY5 · PDBe 5CY5
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.