MolNFT v1 · #11580 · protein
The 2.3 ångström resolution structure of bacillus subtilis LUXS/HOMOCYSTEINE complex
1JQW · Autoinducer-2 production protein luxs: “The 2.3 ångström resolution structure of bacillus subtilis LUXS/HOMOCYSTEINE complex”. X-ray diffraction, 2 ligands (HCS, ZN). MolNFT v1 #11580 on GenesisL1: 3D structure, binding sites and…
- PDB
- 1JQW
- Type
- protein
- Length
- 150 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Autoinducer-2 production protein luxs
- EC
- 4.4.1.21
- UniProt
- O34667
- Ligands
- HCS, ZN
Structure
x-ray diffraction · 1 distinct chain · 33% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Autoinducer-2 production protein luxs (EC 4.4.1.21) | protein | 150 | 33% helix, 23% strand | O34667 |
Ligands and binding sites
- HCS · 2-amino-4-mercapto-butyric acid · ligand · 3 copies · chains A
- ZN · Zinc ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 2 covalent, 1 modified (covalent ligand, oxidation).
Compared structures
- 1JQW · The 2.3 ångström resolution structure of bacillus subtilis LUXS/HOMOCYSTEINE complex · the same entry in another collection · chain A against A, TM-score 1.00
- O34667 · AlphaFold monomer V2.0 prediction for S-ribosylhomocysteine lyase (O34667) · a predicted model of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O34667
- Elsewhere: RCSB PDB 1JQW · PDBe 1JQW · UniProt O34667
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