MolNFT v1 · #115696 · protein
Crystal structure of ABC-type FE3+-hydroxamate transport system from saccharomonospora viridis dsm 43017
5CR9 · ABC-type FE3+-hydroxamate transport system, periplasmic…: “Crystal structure of ABC-type FE3+-hydroxamate transport system from saccharomonospora viridis dsm 43017”. X-ray diffraction, 2 ligands (GLU, MN), 2 pockets (best…
- PDB
- 5CR9
- Type
- protein
- Length
- 290 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- ABC-type FE3+-hydroxamate transport system, periplasmic component
- UniProt
- C7MWN7
- Ligands
- GLU, MN
- Pockets
- 2 · best druggability 0.71
Structure
x-ray diffraction · 1 distinct chain · 42% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | ABC-type FE3+-hydroxamate transport system, periplasmic component | protein | 290 | 42% helix, 18% strand | C7MWN7 |
Ligands and binding sites
- GLU · Glutamic acid · ligand · chains A
- MN · Manganese (II) ion · metal · chains A
- GOL · Glycerol · additive · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 331 | 0.71 | 0.84 | 39 | MN, GLU |
| 2 | 57 | 0.39 | 0.80 | 18 | GOL |
Modifications
Observed in the structure: 3 modified, 1 disulfide (engineered, disulfide).
Compared structures
- 5CR9 · Crystal structure of ABC-type Fe3+-hydroxamate transport system from Saccharomonospora… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C7MWN7
- Elsewhere: RCSB PDB 5CR9 · PDBe 5CR9 · UniProt C7MWN7
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