MolNFT v1 · #115616 · protein

Crystal structure of C239S mutant of a novel disulfide oxidoreductase from deinococcus radiodurans

5CP1 · Frne protein: “Crystal structure of C239S mutant of a novel disulfide oxidoreductase from deinococcus radiodurans”. X-ray diffraction, 2 pockets (best druggability 0.66). MolNFT v1 #115616 on GenesisL1: 3D structure, binding sites…

PDB: 5CP1
Type: protein
Length: 245 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Frne protein
UniProt: Q9RWK7
Pockets: 2 · best druggability 0.66

Structure

x-ray diffraction · 1 distinct chain · 49% helix, 11% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Frne protein	protein	245	49% helix, 11% strand	Q9RWK7

Ligands and binding sites

GOL · Glycerol · additive · 4 copies · chains A
ACT · Acetate ion · additive · 2 copies · chains A
EDO · 1,2-ethanediol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	243	0.66	0.83	28	GOL
2	82	0.48	0.82	17	EDO

Compared structures

5CP1 · Crystal structure of C239S mutant of a novel disulfide oxidoreductase from Deinococcus… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9RWK7
Elsewhere: RCSB PDB 5CP1 · PDBe 5CP1 · UniProt Q9RWK7

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