MolNFT v1 · #115237 · protein + DNA
2.5A structure of qpt-1 with S.AUREUS DNA gyrase and DNA
5CDM: “2.5A structure of qpt-1 with S.AUREUS DNA gyrase and DNA”. X-ray diffraction. MolNFT v1 #115237 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5CDM
- Type
- protein + DNA
- Length
- 1,380 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P66937, Q99XG5
Structure
x-ray diffraction · 8 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | — | protein | 189 | — | P66937 |
| A | — | protein | 482 | — | Q99XG5 |
| D | — | protein | 190 | — | P66937 |
| C | — | protein | 481 | — | Q99XG5 |
| E | — | dna | 8 | — | — |
| I | — | dna | 12 | — | — |
| F | — | dna | 7 | — | — |
| N | — | dna | 11 | — | — |
Compared structures
- Q99XG5 · AlphaFold monomer V2.0 prediction for DNA gyrase subunit a (Q99XG5) · a predicted model of the same protein · chain A against A, TM-score 0.98
- P66937 · AlphaFold monomer V2.0 prediction for DNA gyrase subunit B (P66937) · a predicted model of the same protein · chain B against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P66937
- Every structure of UniProt Q99XG5
- Elsewhere: RCSB PDB 5CDM · PDBe 5CDM · UniProt P66937 · UniProt Q99XG5
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