MolNFT v1 · #115050 · protein
Crystal structure of nourseothricin acetyltransferase
5C82: “Crystal structure of nourseothricin acetyltransferase”. X-ray diffraction, 1 pocket (best druggability 0.65). MolNFT v1 #115050 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5C82
- Type
- protein
- Length
- 170 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Nourseothricin acetyltransferase
- UniProt
- Q08414
- Pockets
- 1 · best druggability 0.65
Structure
x-ray diffraction · 1 distinct chain · 21% helix, 44% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nourseothricin acetyltransferase | protein | 170 | 21% helix, 44% strand | Q08414 |
Ligands and binding sites
- TAR · D(-)-tartaric acid · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 311 | 0.65 | 0.81 | 34 | TAR |
Modifications
Observed in the structure: 4 modified (engineered).
Compared structures
- 5C82 · Crystal structure of Nourseothricin acetyltransferase · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q08414
- Elsewhere: RCSB PDB 5C82 · PDBe 5C82 · UniProt Q08414
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