MolNFT v1 · #114937 · protein
Cobk precorrin-6A reductase
5C4N: “Cobk precorrin-6A reductase”. X-ray diffraction, 1 ligand (NAP), 1 pocket (best druggability 0.72). MolNFT v1 #114937 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5C4N
- Type
- protein
- Length
- 244 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Precorrin-6A reductase
- EC
- 1.3.1.54
- UniProt
- O68098
- Ligands
- NAP
- Pockets
- 1 · best druggability 0.72
Structure
x-ray diffraction · 1 distinct chain · 33% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| D | Precorrin-6A reductase (EC 1.3.1.54) | protein | 244 | 33% helix, 22% strand | O68098 |
Ligands and binding sites
- NAP · Nadp nicotinamide-adenine-dinucleotide phosphate · ligand · chains D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 700 | 0.72 | 0.79 | 58 | NAP |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O68098
- Elsewhere: RCSB PDB 5C4N · PDBe 5C4N · UniProt O68098
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