MolNFT v1 · #114889 · protein
Crystal structure of a designed mn binding peptide
5C39 · P0 manganese cluster peptide: “Crystal structure of a designed mn binding peptide”. X-ray diffraction, 1 ligand (MN). MolNFT v1 #114889 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5C39
- Type
- protein
- Length
- 102 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- P0 manganese cluster peptide
- Ligands
- MN
Structure
x-ray diffraction · 1 distinct chain · 84% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | P0 manganese cluster peptide | protein | 51 | 84% helix, 0% strand | — |
Ligands and binding sites
- MN · Manganese (II) ion · metal · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 1142 Ų buried · 13 hydrogen bonds · protein-protein
Compared structures
- 5C39 · Crystal structure of a designed Mn binding peptide · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 5C39 · PDBe 5C39
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