MolNFT v1 · #11488 · protein
Structural analysis of the yeast actin binding protein ABP1 SH3 domain
1JO8: “Structural analysis of the yeast actin binding protein ABP1 SH3 domain”. X-ray diffraction, 1 ligand (SO4). MolNFT v1 #11488 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1JO8
- Type
- protein
- Length
- 58 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Actin binding protein
- UniProt
- P15891
- Ligands
- SO4
Structure
x-ray diffraction · 1 distinct chain · 5% helix, 45% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Actin binding protein | protein | 58 | 5% helix, 45% strand | P15891 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 1JO8 · Structural analysis of the yeast actin binding protein Abp1 SH3 domain · the same entry in another collection · chain A against A, TM-score 1.00
- P15891 · AlphaFold monomer V2.0 prediction for actin-binding protein (P15891) · a predicted model of the same protein · chain A against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P15891
- Elsewhere: RCSB PDB 1JO8 · PDBe 1JO8 · UniProt P15891
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