MolNFT v1 · #114815 · protein
Nuclease domain of the large terminase subunit GP2 of bacterial virus SF6
5C10 · Gene 2 protein: “Nuclease domain of the large terminase subunit GP2 of bacterial virus SF6”. X-ray diffraction, 2 pockets (best druggability 0.50). MolNFT v1 #114815 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5C10
- Type
- protein
- Length
- 230 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Gene 2 protein
- UniProt
- Q716H3
- Pockets
- 2 · best druggability 0.50
Structure
x-ray diffraction · 1 distinct chain · 42% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Gene 2 protein | protein | 230 | 42% helix, 18% strand | Q716H3 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 180 | 0.50 | 0.77 | 31 | empty |
| 2 | 203 | 0.47 | 0.74 | 21 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q716H3
- Elsewhere: RCSB PDB 5C10 · PDBe 5C10 · UniProt Q716H3
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