MolNFT v1 · #114710 · protein

H17 bat influenza NS1 RNA binding domain

5BXZ · Non-structural protein 1: “H17 bat influenza NS1 RNA binding domain”. X-ray diffraction, 1 pocket (best druggability 0.52). MolNFT v1 #114710 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5BXZ
Type: protein
Length: 139 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Non-structural protein 1
UniProt: H6QM79
Pockets: 1 · best druggability 0.52

Structure

x-ray diffraction · 2 distinct chains · 80% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Non-structural protein 1	protein	69	80% helix, 0% strand	H6QM79
B	Non-structural protein 1	protein	70	80% helix, 0% strand	H6QM79

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	160	0.52	0.79	19	empty

Interfaces

1 interface between chains.

A–B · 1196 Å² buried · 14 hydrogen bonds · protein-protein

Compared structures

5BXZ · H17 Bat Influenza NS1 RNA Binding Domain · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt H6QM79
Elsewhere: RCSB PDB 5BXZ · PDBe 5BXZ · UniProt H6QM79

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