MolNFT v1 · #114687 · protein
Structure of pslg from pseudomonas aeruginosa
5BX9: “Structure of pslg from pseudomonas aeruginosa”. X-ray diffraction, 2 ligands (CD, CL), 4 pockets (best druggability 0.64). MolNFT v1 #114687 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5BX9
- Type
- protein
- Length
- 414 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Pslg
- UniProt
- Q9I1N2
- Ligands
- CD, CL
- Pockets
- 4 · best druggability 0.64
Structure
x-ray diffraction · 1 distinct chain · 32% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pslg | protein | 414 | 32% helix, 26% strand | Q9I1N2 |
Ligands and binding sites
- CD · Cadmium ion · metal · 4 copies · chains A
- CL · Chloride ion · ion · chains A
- EDO · 1,2-ethanediol · additive · 4 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 407 | 0.64 | 0.78 | 41 | CD, EDO |
| 2 | 106 | 0.58 | 0.86 | 22 | empty |
| 3 | 96 | 0.45 | 0.79 | 17 | empty |
| 4 | 87 | 0.33 | 0.74 | 19 | empty |
Compared structures
- 5BX9 · Structure of PslG from Pseudomonas aeruginosa · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9I1N2
- Elsewhere: RCSB PDB 5BX9 · PDBe 5BX9 · UniProt Q9I1N2
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