MolNFT v1 · #114680 · protein
Crystal structure of prl-1 complex with compound analogy 3
5BX1 · Protein tyrosine phosphatase type iva 1: “Crystal structure of prl-1 complex with compound analogy 3”. X-ray diffraction, 2 ligands (4XA, SO4). MolNFT v1 #114680 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5BX1
- Type
- protein
- Length
- 153 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein tyrosine phosphatase type iva 1
- EC
- 3.1.3.48
- UniProt
- Q93096
- Ligands
- 4XA, SO4
Structure
x-ray diffraction · 1 distinct chain · 42% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein tyrosine phosphatase type iva 1 (EC 3.1.3.48) | protein | 153 | 42% helix, 16% strand | Q93096 |
Ligands and binding sites
- 4XA · 3-(5,6-dimethyl-2H-isoindol-2-yl)-N'-[(E)-furan-2-ylmethylidene]benzohydrazide · ligand · chains A
- SO4 · Sulfate ion · ion · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 5BX1 · Crystal Structure of PRL-1 complex with compound analogy 3 · the same entry in another collection · chain A against A, TM-score 1.00
- Q93096 · AlphaFold monomer V2.0 prediction for protein tyrosine phosphatase type iva 1 (Q93096) · a predicted model of the same protein · chain A against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q93096
- Elsewhere: RCSB PDB 5BX1 · PDBe 5BX1 · UniProt Q93096
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