MolNFT v1 · #114642 · protein
Actin binding domain of alpha-actinin from schizosaccharomyces pombe
5BVR · Alpha-actinin-like protein 1: “Actin binding domain of alpha-actinin from schizosaccharomyces pombe”. X-ray diffraction, 1 ligand (ZN). MolNFT v1 #114642 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5BVR
- Type
- protein
- Length
- 229 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Alpha-actinin-like protein 1
- UniProt
- O13728
- Ligands
- ZN
Structure
x-ray diffraction · 1 distinct chain · 59% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alpha-actinin-like protein 1 | protein | 229 | 59% helix, 2% strand | O13728 |
Ligands and binding sites
- ZN · Zinc ion · metal · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5BVR · Actin binding domain of alpha-actinin from Schizosaccharomyces pombe · the same entry in another collection · chain A against A, TM-score 1.00
- O13728 · AlphaFold monomer V2.0 prediction for alpha-actinin-like protein 1 (O13728) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O13728
- Elsewhere: RCSB PDB 5BVR · PDBe 5BVR · UniProt O13728
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