MolNFT v1 · #114523 · protein
Crystal structure of rbcx-iia from chlamydomonas reinhardtii in complex with rbcl C-terminal tail
5BS2 · Ribulose bisphosphate carboxylase large CHAIN,CRRBCX-iia: “Crystal structure of rbcx-iia from chlamydomonas reinhardtii in complex with rbcl C-terminal tail”. X-ray diffraction, 1 pocket (best druggability 0.38). MolNFT v1 #114523…
- PDB
- 5BS2
- Type
- protein
- Length
- 232 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ribulose bisphosphate carboxylase large CHAIN,CRRBCX-iia; Ribulose bisphosphate…
- EC
- 4.1.1.39
- UniProt
- P00877, A8HQH2
- Pockets
- 1 · best druggability 0.38
Structure
x-ray diffraction · 2 distinct chains · 76% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Ribulose bisphosphate carboxylase large CHAIN,CRRBCX-iia (EC 4.1.1.39) | protein | 113 | 80% helix, 0% strand | P00877, A8HQH2 |
| R | Ribulose bisphosphate carboxylase large chain (EC 4.1.1.39) | protein | 6 | 0% helix, 0% strand | P00877 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 70 | 0.38 | 0.78 | 14 | empty |
Interfaces
2 interfaces between chains.
- A–B · 1992 Ų buried · 21 hydrogen bonds · protein-protein
- B–R · 361 Ų buried · 1 hydrogen bond · protein-protein
Compared structures
- 5BS2 · Crystal structure of RbcX-IIa from Chlamydomonas reinhardtii in complex with RbcL… · the same entry in another collection · chain A against A, TM-score 1.00
- P00877 · AlphaFold monomer V2.0 prediction for ribulose bisphosphate carboxylase large chain… · a predicted model of the same protein · chain R against A, TM-score 0.60
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P00877
- Every structure of UniProt A8HQH2
- Elsewhere: RCSB PDB 5BS2 · PDBe 5BS2 · UniProt P00877 · UniProt A8HQH2
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