MolNFT v1 · #114465 · protein

Crystal structure of uncharacterized protein LPG1496 legionella pneumophila subsp. pneumophila

5BQ9: “Crystal structure of uncharacterized protein LPG1496 legionella pneumophila subsp. pneumophila”. X-ray diffraction, 7 pockets (best druggability 0.66). MolNFT v1 #114465 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5BQ9
Type: protein
Length: 866 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Uncharacterized protein
UniProt: Q5ZVE4
Pockets: 7 · best druggability 0.66

Structure

x-ray diffraction · 2 distinct chains · 48% helix, 12% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Uncharacterized protein	protein	429	48% helix, 12% strand	Q5ZVE4
B	Uncharacterized protein	protein	437	48% helix, 13% strand	Q5ZVE4

Pockets

7 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	634	0.66	0.76	72	empty
2	296	0.62	0.80	33	empty
3	292	0.59	0.78	32	empty
4	368	0.55	0.74	54	empty
5	156	0.38	0.72	27	empty

Interfaces

1 interface between chains.

A–B · 598 Å² buried · 5 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 18 modified (engineered).

Compared structures

5BQ9 · Crystal structure of uncharacterized protein lpg1496 Legionella pneumophila subsp.… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q5ZVE4
Elsewhere: RCSB PDB 5BQ9 · PDBe 5BQ9 · UniProt Q5ZVE4

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