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MolNFT v1 · #114408 · protein

Ferredoxin component of 3-nitrotoluene dioxygenase from diaphorobacter sp. strain DS2

5BOK: “Ferredoxin component of 3-nitrotoluene dioxygenase from diaphorobacter sp. strain DS2”. X-ray diffraction, 2 ligands (FES, FE). MolNFT v1 #114408 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
5BOK
Type
protein
Length
102 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Ferredoxin
UniProt
M9PSS0
Ligands
FES, FE

Structure

x-ray diffraction · 1 distinct chain · 3% helix, 48% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AFerredoxinprotein1023% helix, 48% strandM9PSS0

Ligands and binding sites

  • FES · Fe2/s2 (inorganic) cluster · ligand · chains A
  • FE · Fe (III) ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 5BOK · Ferredoxin component of 3-nitrotoluene dioxygenase from Diaphorobacter sp. strain DS2 · the same entry in another collection · chain A against A, TM-score 1.00

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