MolNFT v1 · #114194 · protein

Crystal structure of heme binding protein hmut R242A mutant

5B51 · ABC-type transporter, periplasmic component: “Crystal structure of heme binding protein hmut R242A mutant”. X-ray diffraction, 1 ligand (HEM), 1 pocket (best druggability 0.55). MolNFT v1 #114194 on GenesisL1: 3D structure, binding…

PDB: 5B51
Type: protein
Length: 324 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: ABC-type transporter, periplasmic component
UniProt: Q8NTB8
Ligands: HEM
Pockets: 1 · best druggability 0.55

Structure

x-ray diffraction · 1 distinct chain · 42% helix, 17% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	ABC-type transporter, periplasmic component	protein	324	42% helix, 17% strand	Q8NTB8

Ligands and binding sites

HEM · Protoporphyrin IX containing Fe · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	161	0.55	0.80	25	HEM

Compared structures

5B51 · Crystal structure of heme binding protein HmuT R242A mutant · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8NTB8
Elsewhere: RCSB PDB 5B51 · PDBe 5B51 · UniProt Q8NTB8

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