MolNFT v1 · #114084 · protein

Crystal structure of the chloride-bound form of blue copper nitrite reductase

5B1K · Copper-containing nitrite reductase: “Crystal structure of the chloride-bound form of blue copper nitrite reductase”. X-ray diffraction, 2 ligands (CU, CL), 1 pocket (best druggability 0.43). MolNFT v1 #114084 on GenesisL1: 3D…

PDB: 5B1K
Type: protein
Length: 334 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Copper-containing nitrite reductase
EC: 1.7.2.1
UniProt: O68601
Ligands: CU, CL
Pockets: 1 · best druggability 0.43

Structure

x-ray diffraction · 1 distinct chain · 10% helix, 40% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Copper-containing nitrite reductase (EC 1.7.2.1)	protein	334	10% helix, 40% strand	O68601

Ligands and binding sites

CU · Copper (II) ion · metal · 2 copies · chains A
CL · Chloride ion · ion · chains A
PG4 · Tetraethylene glycol · additive · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	97	0.43	0.79	17	empty

Compared structures

5B1K · Crystal structure of the chloride-bound form of blue copper nitrite reductase · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O68601
Elsewhere: RCSB PDB 5B1K · PDBe 5B1K · UniProt O68601

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