MolNFT v1 · #114020 · protein
Crystal structure of a membrane protein from pseudomonas aeruginosa
5AZO · Multidrug efflux outer membrane protein oprn: “Crystal structure of a membrane protein from pseudomonas aeruginosa”. X-ray diffraction, 4 pockets (best druggability 0.35). MolNFT v1 #114020 on GenesisL1: 3D structure, binding sites…
- PDB
- 5AZO
- Type
- protein
- Length
- 444 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Multidrug efflux outer membrane protein oprn
- UniProt
- Q9I0Y7
- Pockets
- 4 · best druggability 0.35
Structure
x-ray diffraction · 1 distinct chain · 66% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Multidrug efflux outer membrane protein oprn | protein | 444 | 66% helix, 14% strand | Q9I0Y7 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 55 | 0.35 | 0.78 | 15 | empty |
| 2 | 67 | 0.34 | 0.76 | 12 | empty |
| 3 | 55 | 0.32 | 0.76 | 14 | empty |
| 4 | 78 | 0.30 | 0.73 | 15 | empty |
Compared structures
- 5AZO · Crystal structure of a membrane protein from Pseudomonas aeruginosa · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9I0Y7
- Elsewhere: RCSB PDB 5AZO · PDBe 5AZO · UniProt Q9I0Y7
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