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MolNFT v1 · #114017 · protein

Crystal structure of lgg-2 fused with an eeeweel peptide

5AZH · Eeeweel PEPTIDE,PROTEIN lgg-2: “Crystal structure of lgg-2 fused with an eeeweel peptide”. X-ray diffraction, 1 ligand (MG), 1 pocket (best druggability 0.41). MolNFT v1 #114017 on GenesisL1: 3D structure, binding sites and pockets…

PDB
5AZH
Type
protein
Length
127 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Eeeweel PEPTIDE,PROTEIN lgg-2
UniProt
Q23536
Ligands
MG
Pockets
1 · best druggability 0.41

Structure

x-ray diffraction · 1 distinct chain · 30% helix, 21% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AEeeweel PEPTIDE,PROTEIN lgg-2protein12730% helix, 21% strandQ23536

Ligands and binding sites

  • MG · Magnesium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
11530.410.7431empty

Compared structures

  • 5AZH · Crystal structure of LGG-2 fused with an EEEWEEL peptide · the same entry in another collection · chain A against A, TM-score 1.00
  • Q23536 · AlphaFold monomer V2.0 prediction for protein lgg-2 (Q23536) · a predicted model of the same protein · chain A against A, TM-score 0.91

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