MolNFT v1 · #113940 · protein

Crystal structure of S.CEREVISIAE KTI11P

5AX2 · Diphthamide biosynthesis protein 3: “Crystal structure of S.CEREVISIAE KTI11P”. X-ray diffraction, 1 ligand (CD). MolNFT v1 #113940 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5AX2
Type: protein
Length: 78 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Diphthamide biosynthesis protein 3
UniProt: Q3E840
Ligands: CD

Structure

x-ray diffraction · 1 distinct chain · 24% helix, 32% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Diphthamide biosynthesis protein 3	protein	78	24% helix, 32% strand	Q3E840

Ligands and binding sites

CD · Cadmium ion · metal · 4 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

5AX2 · Crystal structure of S.cerevisiae Kti11p · the same entry in another collection · chain A against A, TM-score 1.00
Q3E840 · AlphaFold monomer V2.0 prediction for diphthamide biosynthesis protein 3 (Q3E840) · a predicted model of the same protein · chain A against A, TM-score 0.93

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q3E840
Elsewhere: RCSB PDB 5AX2 · PDBe 5AX2 · UniProt Q3E840

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.