MolNFT v1 · #11390 · protein
Crystal structure of cn-ligated component III glycera dibranchiata monomeric hemoglobin
1JL7 · Monomer hemoglobin component III: “Crystal structure of cn-ligated component III glycera dibranchiata monomeric hemoglobin”. X-ray diffraction, 2 ligands (HEM, CYN), 1 pocket (best druggability 0.73). MolNFT v1 #11390 on GenesisL1…
- PDB
- 1JL7
- Type
- protein
- Length
- 147 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Monomer hemoglobin component III
- UniProt
- P02216
- Ligands
- HEM, CYN
- Pockets
- 1 · best druggability 0.73
Structure
x-ray diffraction · 1 distinct chain · 79% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Monomer hemoglobin component III | protein | 147 | 79% helix, 0% strand | P02216 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 244 | 0.73 | 0.87 | 29 | CYN, HEM |
Compared structures
- 1JL7 · Crystal Structure Of CN-Ligated Component III Glycera Dibranchiata Monomeric Hemoglobin · the same entry in another collection · chain A against A, TM-score 1.00
- P02216 · AlphaFold monomer V2.0 prediction for globin, major monomeric component (P02216) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P02216
- Elsewhere: RCSB PDB 1JL7 · PDBe 1JL7 · UniProt P02216
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