MolNFT v1 · #113781 · protein
Actinobacillus actinomycetemcomitans OMP100 residues 133-198 fused to GCN4 adaptors
5APP · General control protein GCN4,GENERAL control protein GCN4…: “Actinobacillus actinomycetemcomitans OMP100 residues 133-198 fused to GCN4 adaptors”. X-ray diffraction, 1 ligand (CL). MolNFT v1 #113781 on GenesisL1: 3D structure…
- PDB
- 5APP
- Type
- protein
- Length
- 383 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- General control protein GCN4,GENERAL control protein GCN4, outer membrane protein…
- UniProt
- P03069
- Ligands
- CL
Structure
x-ray diffraction · 2 distinct chains · 91% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | General control protein GCN4,GENERAL control protein GCN4, outer membrane protein 100,GENERAL control protein GCN4 | protein | 127 | 91% helix, 2% strand | P03069 |
| B, C | General control protein GCN4,GENERAL control protein GCN4, outer membrane protein 100,GENERAL control protein GCN4 | protein | 128 | 91% helix, 2% strand | P03069 |
Ligands and binding sites
- CL · Chloride ion · ion · 5 copies · chains A, B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
3 interfaces between chains.
- A–B · 2583 Ų buried · 18 hydrogen bonds · protein-protein
- A–C · 2540 Ų buried · 13 hydrogen bonds · protein-protein
- B–C · 2522 Ų buried · 17 hydrogen bonds · protein-protein
Compared structures
- 5APP · Actinobacillus actinomycetemcomitans OMP100 residues 133-198 fused to GCN4 adaptors · the same entry in another collection · chain A against A, TM-score 1.00
- P03069 · AlphaFold monomer V2.0 prediction for general control transcription factor GCN4 (P03069) · a predicted model of the same protein · chain A against A, TM-score 0.39
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P03069
- Elsewhere: RCSB PDB 5APP · PDBe 5APP · UniProt P03069
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