MolNFT v1 · #113703 · protein + RNA
Mechanism of EIF6 release from the nascent 60S ribosomal subunit
5ANB: “Mechanism of EIF6 release from the nascent 60S ribosomal subunit”. Electron microscopy. MolNFT v1 #113703 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5ANB
- Type
- protein + RNA
- Length
- 4,187 residues
- Chains
- 12
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P34113, Q54XI5, P22685, Q54J50, Q54G86, Q54J69, Q54VN6, P14794, Q551M2, Q9Y3A5, Q7Z2Z2
Structure
electron microscopy · 12 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 398 | — | P34113 |
| B | — | protein | 188 | — | Q54XI5 |
| C | — | protein | 205 | — | P22685 |
| D | — | protein | 166 | — | Q54J50 |
| E | — | protein | 136 | — | Q54G86 |
| F | — | protein | 217 | — | Q54J69 |
| G | — | protein | 69 | — | Q54VN6 |
| H | — | protein | 52 | — | P14794 |
| I | — | protein | 224 | — | Q551M2 |
| J | — | protein | 250 | — | Q9Y3A5 |
| K | — | protein | 1120 | — | Q7Z2Z2 |
| N | — | rna | 1162 | — | — |
Compared structures
- Q551M2 · AlphaFold monomer V2.0 prediction for eukaryotic translation initiation factor 6 (Q551M2) · a predicted model of the same protein · chain I against A, TM-score 0.95
- Q54XI5 · AlphaFold monomer V2.0 prediction for 60S ribosomal protein L9 (Q54XI5) · a predicted model of the same protein · chain B against A, TM-score 0.94
- Q54G86 · AlphaFold monomer V2.0 prediction for 60S ribosomal protein L23 (Q54G86) · a predicted model of the same protein · chain E against A, TM-score 0.94
- Q54J69 · AlphaFold monomer V2.0 prediction for 60S ribosomal protein L10 (Q54J69) · a predicted model of the same protein · chain F against A, TM-score 0.93
- P34113 · AlphaFold monomer V2.0 prediction for 60S ribosomal protein L3 (P34113) · a predicted model of the same protein · chain A against A, TM-score 0.91
- P14794 · AlphaFold monomer V2.0 prediction for ubiquitin-60S ribosomal protein L40 (P14794) · a predicted model of the same protein · chain H against A, TM-score 0.87
- Q7Z2Z2 · AlphaFold monomer V2.0 prediction for elongation factor-like GTPase 1 (Q7Z2Z2) · a predicted model of the same protein · chain K against A, TM-score 0.74
- P22685 · AlphaFold monomer V2.0 prediction for 60S acidic ribosomal protein P0 (P22685) · a predicted model of the same protein · chain C against A, TM-score 0.69
- Q54J50 · AlphaFold monomer V2.0 prediction for 60S ribosomal protein L12 (Q54J50) · a predicted model of the same protein · chain D against A, TM-score 0.67
- Q54VN6 · AlphaFold monomer V2.0 prediction for 60S ribosomal protein L24 (Q54VN6) · a predicted model of the same protein · chain G against A, TM-score 0.67
- Q9Y3A5 · AlphaFold monomer V2.0 prediction for ribosome maturation protein sbds (Q9Y3A5) · a predicted model of the same protein · chain J against A, TM-score 0.63
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P34113
- Every structure of UniProt Q54XI5
- Every structure of UniProt P22685
- Every structure of UniProt Q54J50
- Every structure of UniProt Q54G86
- Every structure of UniProt Q54J69
- Every structure of UniProt Q54VN6
- Every structure of UniProt P14794
- Every structure of UniProt Q551M2
- Every structure of UniProt Q9Y3A5
- Every structure of UniProt Q7Z2Z2
- Elsewhere: RCSB PDB 5ANB · PDBe 5ANB · UniProt P34113 · UniProt Q54XI5 · UniProt P22685 · UniProt Q54J50 · UniProt Q54G86 · UniProt Q54J69 · UniProt Q54VN6 · UniProt P14794 · UniProt Q551M2 · UniProt Q9Y3A5 · UniProt Q7Z2Z2
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