MolNFT v1 · #113525 · protein
X-ray structure of 113CD-substituted perdeuterated pyrococcus furiosus rubredoxin to 1.02A resolution at 295K in a quartz capillary
5AI3: “X-ray structure of 113CD-substituted perdeuterated pyrococcus furiosus rubredoxin to 1.02A resolution at 295K…”. X-ray diffraction, 1 ligand (CD). MolNFT v1 #113525 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5AI3
- Type
- protein
- Length
- 54 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Rubredoxin
- UniProt
- P24297
- Ligands
- CD
Structure
x-ray diffraction · 1 distinct chain · 17% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Rubredoxin | protein | 54 | 17% helix, 26% strand | P24297 |
Ligands and binding sites
- CD · Cadmium ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5AI3 · X-ray structure of 113Cd-substituted Perdeuterated Pyrococcus furiosus rubredoxin to… · the same entry in another collection · chain A against A, TM-score 1.00
- P24297 · AlphaFold monomer V2.0 prediction for rubredoxin (P24297) · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P24297
- Elsewhere: RCSB PDB 5AI3 · PDBe 5AI3 · UniProt P24297
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