MolNFT v1 · #113423 · protein

Crystal structure of candida albicans MEP2

5AEZ: “Crystal structure of candida albicans MEP2”. X-ray diffraction, 1 ligand (BNG), 4 pockets (best druggability 0.62). MolNFT v1 #113423 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5AEZ
Type: protein
Length: 455 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: MEP2
UniProt: Q59UP8
Ligands: BNG
Pockets: 4 · best druggability 0.62

Structure

x-ray diffraction · 1 distinct chain · 64% helix, 1% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	MEP2	protein	455	64% helix, 1% strand	Q59UP8

Ligands and binding sites

BNG · nonyl beta-D-glucopyranoside · ligand · 5 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	304	0.62	0.79	44	empty
2	160	0.49	0.77	31	empty
3	57	0.32	0.76	13	empty
4	65	0.31	0.75	13	empty

Compared structures

5AEZ · Crystal structure of Candida albicans Mep2 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q59UP8
Elsewhere: RCSB PDB 5AEZ · PDBe 5AEZ · UniProt Q59UP8

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