MolNFT v1 · #113307 · protein

Structure of the N-terminal domain of the metalloprotease prtv from vibrio cholerae

5ABK: “Structure of the N-terminal domain of the metalloprotease prtv from vibrio cholerae”. Solution nmr, 1 pocket (best druggability 0.31). MolNFT v1 #113307 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5ABK
Type: protein
Length: 84 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Metalloprotease
UniProt: C3NY08
Pockets: 1 · best druggability 0.31

Structure

solution nmr · 1 distinct chain · 35% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Metalloprotease	protein	84	35% helix, 0% strand	C3NY08

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	59	0.31	0.75	15	empty

Compared structures

5ABK · Structure of the N-terminal domain of the metalloprotease PrtV from Vibrio cholerae · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt C3NY08
Elsewhere: RCSB PDB 5ABK · PDBe 5ABK · UniProt C3NY08

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